Nanohaloarchaea
Nanohaloarchaea is a clade of diminutive archaea with small genomes and limited metabolic capabilities. They are ubiquitous in hypersaline habitats, which they share with the extremely halophilic and phylogenetically distant haloarchaea.
| Nanohaloarchaea | |
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| Scientific classification | |
| Domain: | |
| Kingdom: | |
| Phylum: | |
| Class: | Nanohaloarchaea Narasingarao et al. 2012 |
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Nanohaloarchaea were first identified from metagenomic data as a class of uncultivated halophilic archaea composed of 6 clades.[1][2]and were subsequently placed in the phylum Nanohaloarchaeota within the Diapherotrites, Parvarchaeota, Aenigmarchaeota, Nanoarchaeota, Nanohaloarchaeota (DPANN) superphylum.[3]
The lineage has since been identified in data from a range of hypersaline environments including: Australian thalassohaline lake,[4] Spanish saltern,[5] Russian soda brine,[6] Californian saltern,[7] and Chilean halite[8]
Taxonomy
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[9] and National Center for Biotechnology Information (NCBI).[10]
- Candidatus Haloredivivus ♠ Ghai et al. 2011
- Candidatus Nanosalina ♠ Narasingarao et al. 2012
- Candidatus Nanosalinarum ♠ Narasingarao et al. 2012
Notes:
♠ Strains found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LPSN)
References
- Narasingarao; et al. (2011). "De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities". ISME J. 6 (1): 81–93. doi:10.1038/ismej.2011.78. PMC 3246234. PMID 21716304.
- Ghai, Rohit; Lejla Pašić; Ana Beatriz Fernandez; Ana-Belen Martin-Cuadrado; et al. (10 October 2011). "New Abundant Microbial Groups in Aquatic Hypersaline Environments". Scientific Reports. 1: 135. Bibcode:2011NatSR...1E.135G. doi:10.1038/srep00135. PMC 3216616. PMID 22355652.
- Rinke C, Schwientek P, Sczyrba A, Ivanova NN, Anderson IJ, Cheng JF, Darling A, Malfatti S, Swan BK, Gies EA, Dodsworth JA, Hedlund BP, Tsiamis G, Sievert SM, Liu WT, Eisen JA, Hallam SJ, Kyrpides NC, Stepanauskas R, Rubin EM, Hugenholtz P, Woyke T (July 25, 2013). "Insights into the phylogeny and coding potential of microbial dark matter". Nature. 499, 431–437 (2013) (7459): 431–437. Bibcode:2013Natur.499..431R. doi:10.1038/nature12352. PMID 23851394. Retrieved 2 March 2021.CS1 maint: multiple names: authors list (link)
- Karen Andrade, Jörn Logemann, Karla B Heidelberg, Joanne B Emerson, Luis R Comolli, Laura A Hug, Alexander J Probst, Angus Keillar, Brian C Thomas, Christopher S Miller, Eric E Allen, John W Moreau, Jochen J Brocks & Jillian F Banfield (28 April 2015). "Metagenomic and lipid analyses reveal a diel cycle in a hypersaline microbial ecosystem". ISME J. ISME J 9, 2697–2711 (2015) (12): 2697–2711. doi:10.1038/ismej.2015.66. PMC 4817636. PMID 25918833.CS1 maint: multiple names: authors list (link)
- Rohit Ghai, Lejla Pašić, Ana Beatriz Fernández, Ana-Belen Martin-Cuadrado, Carolina Megumi Mizuno, Katherine D. McMahon, R. Thane Papke, Ramunas Stepanauskas, Beltran Rodriguez-Brito, Forest Rohwer, Cristina Sánchez-Porro, Antonio Ventosa & Francisco Rodríguez-Valera (31 October 2011). "New Abundant Microbial Groups in Aquatic Hypersaline Environments". Scientific Reports. 1 (Sci Rep 1, 135 (2011)): 135. Bibcode:2011NatSR...1E.135G. doi:10.1038/srep00135. PMC 3216616. PMID 22355652.CS1 maint: multiple names: authors list (link)
- Vavourakis Charlotte D., Ghai Rohit, Rodriguez-Valera Francisco, Sorokin Dimitry Y., Tringe Susannah G., Hugenholtz Philip, Muyzer Gerard (25 February 2016). "Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines". Frontiers in Microbiology. 7: 211. doi:10.3389/fmicb.2016.00211. PMC 4766312. PMID 26941731.CS1 maint: multiple names: authors list (link)
- Olga Zhaxybayeva 1 , Ramunas Stepanauskas, Nikhil Ram Mohan, R Thane Papke (29 January 2013). "Cell sorting analysis of geographically separated hypersaline environments". Extremophiles. 17, 2 (2013) (2): 265–275. doi:10.1007/s00792-013-0514-z. PMID 23358730. S2CID 5933801. Retrieved 2 March 2021.CS1 maint: multiple names: authors list (link)
- Alexander Crits‐Christoph Diego R. Gelsinger Bing Ma Jacek Wierzchos Jacques Ravel Alfonso Davila M. Cristina Casero Jocelyne DiRuggiero (21 March 2016). "Functional interactions of archaea, bacteria and viruses in a hypersaline endolithic community". Environmental Microbiology. 18 (2016 v.18 no.6): 2064–2077. doi:10.1111/1462-2920.13259. PMID 26914534. Retrieved 2 March 2021.
- J.P. Euzéby. "Euryarchaeota". List of Prokaryotic names with Standing in Nomenclature (LPSN). Archived from the original on 2013-01-27. Retrieved 2011-11-17.
- Sayers; et al. "Nanohaloarchaea". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2011-06-05.
Further reading
- Ghai; et al. (2011). "New Abundant Microbial Groups in Aquatic Hypersaline Environments". Scientific Reports. 1 (135): 135. Bibcode:2011NatSR...1E.135G. doi:10.1038/srep00135. PMC 3216616. PMID 22355652.
- Narasingarao; et al. (2012). "De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities". ISME J. 6 (1): 81–93. doi:10.1038/ismej.2011.78. PMC 3246234. PMID 21716304.
- Narasingarao; et al. (2012). "De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities". ISME J. 6 (1): 81–93. doi:10.1038/ismej.2011.78. PMC 3246234. PMID 21716304.
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